Conference CEEPC/IPM/CMSC 2022 (Program)

The invitation to give plenary lecture was accepted by:

• Karl Mechtler (Research Institute of Molecular Pathology, Vienna)
• Carlos Cordeiro (Universidade de Lisboa)
• Berndt Wollscheid (ETH Zurich)

Program CEEPC/IPM/CMSC 2022

Complete program including abstracts for download

Thursday September 29, 2022

8:30 - 10:00 Registration

10:00 - 10:10 Opening of the 16th CEEPC, 8th IPM and 10th CMSC

10:10 - 11:00 Plenary lecture I: New insights through Single-Cell Proteomics (Chairperson: Petr Novák)

• Karl Mechtler

11:00 - 11:20 Coffee break

11:20 - 13:00 Session I - Method Development

• Chairperson: Katarina Davalieva

11:20 - 11:40 Identification of potential cell-surface targets and druggable enzymes in human pheochromocytoma and paraganglioma using classical and membrane-targeting proteomic approaches

• Ondřej Vít

11:40 - 12:00 Global SEC-PCP-SILAC mapping reveals protein complexes mediating NF-κB activation in breast cancer

• Petr Lapčík

12:00 - 12:20 Determination of changes in the milk proteome in production and storage of kefir using mass spectrometry-based omics approaches

• Haci Mehmet Kayili

12:20 - 12:40 Non-Immunoaffinity Extraction of Intact Proteins from Biological Fluids and Their Analysis by Liquid Chromatography – Triple Quadrupole Mass Spectrometry

• Katarína Maráková

12:40 - 13:00 Advancing Cyclic Ion Mobility Mass Spectrometry Methods for Studying Biomolecules: Towards the Conformational Dynamics of Mega Dalton Protein Aggregates

• Adam Pruška

13:00 - 15:30 Lunch + Poster session I (Odd-numbered posters)

15:30 - 16:30 Company Workshop – Bruker Daltonics

The latest proteomics development at Bruker

• Gary Kruppa

Clinical (phospho)proteomics with TIMS and PASEF

• Florian Meier

16:30 - 16:50 Coffee break

16:50 - 17:30 Short Talks

• Chairperson: Petr Man

Detection of C. difficile Toxin B by biomolecule-modified chips and mass spectrometry

• Josef Dvořák

Optimized HDX-MS workflow for antibody structure monitoring by HDX-MS

• Zuzana Kalaninová

RPLC-UV and HILIC-UV characterisation of on-site produced Ramucirumab-DTPA immunoconjugate

• Denis Naplekov

Collision energy setting in proteomics and glycoproteomics: From individual species to a practical perspective

• Agnes Revesz

Novel circulating biomarkers of biventricular heart failure

• Matěj Běhounek

Comprehensive metabolomic and lipidomic study of tauopathy and Alzheimer's disease patients

• Dana Dobešová

Overlooked oligomerization process in Azurin, a model metalloprotein

• Roman Tuzhilkin

17:30 - 18:00 Josef Chmelik Award

18:00 - 19:30 Guided tour to the conference dinner

19:30 - 23:00 Conference dinner and sightseeing boat trip

Sponsors

• Bruker Daltonics
• Amedis
• Merck
• Beckman coulter
• Pragolab
• Waters Corporation

ČSHS: Sponsors: CEEPC/IPM/CMSC 2022

Friday September 30, 2022

8:50 - 9:40 Plenary lecture II: An FT-ICR-MS metabolomic journey (Chairperson: Michael Volný)

• Carlos Cordeiro

9:40 - 11:20 Session II - Novel Instrumentation and approaches

• Chairperson: Lászlo Drahos

9:40 - 10:00 In a flash of light: Native mass spectrometry for single particle imaging with X ray free electron lasers

• Alan Kádek

10:00 - 10:20 Qualitative and quantitative advancements of QTOF performance: the SCIEX ZenoTOF 7600 system

• Volker Kruft

10:20 - 10:40 Synergistic success of proteo-genomics in profiling human tear fluid for disease biomarkers using a novel high sensitivity Immunoassay

• Suresh Jivan Gadher

10:40 - 11:00 Back to Basics with Antibodies

• Stanislav Kukla

11:00 - 11:20 Two-dimensional mass spectrometry for top-down analysis and structural characterization of proteins

• Maria van Agthoven

11:20 - 11:40 Coffee break

11:40 - 13:00 Session Session III - MS and SW tools

• Chairperson: Eva Csosz

11:40 - 12:00 Rapid ion mobility-resolved phosphoproteomics with dia-PASEF

• Florian Meier

12:00 - 12:20 Prediction of Intact N-Glycopeptide Retention Time Windows in Hydrophilic Interaction Liquid Chromatography

• Tomáš Ječmen

12:20 - 12:40 Quantification of small molecules in liquid chromatography/mass spectrometry datasets by CycloBranch

• Jiří Novák

12:40 - 13:00 Mass spectrometric analysis of intact proteins: the dark side of deconvolution

• Lászlo Drahos

13:00 - 15:30 Lunch + Poster session II (Even-numbered posters)

15:30 - 17:30 Session IV - Applications in Biomedicine 1

• Chairperson: Maria van Agthoven

15:30 - 15:50 Identification of potential biomarkers for azoospermia by human testis proteomic analysis

• Katarina Davalieva

15:50 - 16:10 Proteotype classification of renal cell carcinoma for prognosis and therapy response

• Pavel Bouchal

16:10 - 16:30 Stability Study of Triacetylfusarinine C and Gliotoxin in bodily fluids

• Jiří Houšť

16:30 - 16:50 MALDI-TOF mass spectrometry: A powerful method for blood meal identification in insect vectors

• Petr Halada

16:50 - 17:10 Characterization of glycosphingolipids in iPSC-derived cerebral organoids and its application in neurodegenerative disorders

• Durga Jha

17:10 - 17:30 Redox resetting by modulation of redox sensor Kelch-like ECH-associated protein 1 restores leukemic cells sensitivity to Azacytidine

• Kristýna Pimková

17:30 - 18:10 Zdeněk Herman Award presented by Resonance Foundation and presentation of the winning thesis

18:10 - 18:30 Coffee break

18:30 - 19:00 General assembly of the CSMS

Saturday October 1, 2022

8:50 - 10:50 Session V - Applications in Biomedicine 2

• Chairperson: Haci Mehmet Kayili

8:50-9:10 Proteomic Analysis of Hepatitis B Virus

• Martin Hubálek

9:10-9:30 The single amino acid substitutions in Mason-Pfizer Monkey Virus matrix protein modulate its proteolytic cleavage rate

• Jakub Sýs

9:30-9:50 Cardiac alarmins as residual risk markers of atherosclerosis under lipid-lowering therapy

• Viorel-Iulian Suica

9:50-10:10 Cervical mucus – a non-invasive uterine biomarker source?

• Tomáš Oždian

10:10-10:30 High-Throughput µLC-MS/MS Lipidomics of 3D In Vitro Disease Models to Investigate Lipid Dysregulation

• Darshak Gadara

10:30-10:50 Multi-omics network analysis in atherosclerosis reveals mechanisms driving the progression towords complicated lesion

• Eva Csosz

10:50 - 11:10 Coffee break

11:10 - 12:00 Plenary lecture III: Light-mediated discovery of surfaceome nanoscale organization and inter-cellular receptor interaction networks (Chairperson: Pavel Bouchal)

• Bernd Wollscheid

12:00 - 12:20 Poster prize, Closing remarks

12:20 - 13:30 Lunch