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Evaluation of fluoroorganic compounds with benchtop 19 F NMR

Applications | 2017 | Thermo Fisher ScientificInstrumentation
NMR
Industries
Pharma & Biopharma
Manufacturer
Thermo Fisher Scientific

Summary

Significance of the Topic


Fluorine 19 NMR offers unique insights into fluoroorganic compounds due to strong chemical shift dispersion and rich coupling patterns. This technique is critical in pharmaceutical development agrochemical research and materials science where precise structural information on fluorine substituents influences properties such as acidity lipophilicity and reactivity.

Objectives and Study Overview


This application note aims to demonstrate the capabilities of a compact benchtop 19F NMR spectrometer for routine analysis of various fluorinated molecules. The study covers mono and polyfluorinated aromatic compounds a fluorotelomer intermediate and a hydrofluorocarbon fluid to highlight spectral resolution and coupling analysis.

Methodology and Instrumentation


The study employed a Thermo Fisher Scientific picoSpin 80 benchtop 19F NMR spectrometer operating at 77 MHz. Spectra were acquired with a 90° pulse 1000 ms acquisition time and 10 s recycle delay. Hexafluorobenzene was used as internal reference. Data was processed with MestreLab Research Mnova applying zero filling phase correction and exponential apodization. Spectral width was optimized for the 19F chemical shift range.

Instrumentation
  • picoSpin 80 19F NMR permanent magnet spectrometer
  • Capillary cartridge probe with microfluidic flowpath
  • JCAMP-DX file format and MestreLab Research Mnova software

Main Results and Discussion


Mono fluorinated aromatics showed well resolved multiplets between -200 and -100 ppm with 3 JFH and 4 JFH coupling patterns. The trifluoromethyl group produced a singlet reflecting first order coupling. The fluorotelomer intermediate exhibited distinct resonances for primary and secondary alkyl fluorides allowing detailed J coupling analysis including 2 JFF and 3 JFF values. The hydrofluorocarbon fluid displayed complex multiplet patterns in both 1H and 19F spectra with geminal and vicinal coupling constants up to 43 Hz confirming structural assignments.

Benefits and Practical Applications


  • High spectral resolution simplifies identification of individual fluorine sites
  • Wide chemical shift window reduces signal overlap
  • Coupling constants provide direct information on molecular connectivity
  • Compact benchtop format enables routine quality control in pharmaceutical agrochemical and materials laboratories

Future Trends and Opportunities


Advances in benchtop magnet technology and software automation are expected to further simplify 19F NMR adoption in routine analysis. Integration with flow platforms and high throughput sample handling will support rapid screening of fluorinated libraries. Machine learning could enhance spectral interpretation and compound classification.

Conclusion


Benchtop 19F NMR provides an accessible method for detailed analysis of fluorine containing compounds. Its combination of broad chemical shift range first order coupling patterns and high resolution spectra makes it a valuable complement to proton and carbon NMR in research and quality control environments.

Reference


  • Application Note AN52995 Thermo Fisher Scientific 2017

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